This script generates a genome file. The file will include all complete genomes plus the ones listed as parameters.
The currently-supported command-line options are as follows.
Name suffix to be used for log files. If omitted, the PID is used.
Numeric trace level. A higher trace level causes more messages to appear. The
default trace level is 2. Tracing will be directly to the standard output
as well as to a traceUser.log file in the FIG temporary directory,
where User is the value of the user option above.
If specified, turns on tracing of SQL activity.
Save the standard and error output to files. The files will be created
in the FIG temporary directory and will be named errUser.log and
outUser.log, respectively, where User is the value of the
user option above.
Display this command's parameters and options.
Phone number to message when the script is complete.
Name of the gene file to produce. The default is genes.tbl in the SproutData
directory.
Access code to assign to the genomes.